Country for PR: United Kingdom
Contributor: PR Newswire Europe
Wednesday, March 13 2019 - 05:38
AsiaNet
Oxford Nanopore Launches Flongle for Rapid, Smaller DNA/RNA Sequencing Tests in Any Environment
OXFORD, England, March 13, 2019 /PRNewswire-AsiaNet/ --

Oxford Nanopore has today made Flongle starter packs available to purchase 
https://store.nanoporetech.com/flongle.html, after initial testing in an 
early-access programme.  Flongle introduces a new paradigm of smaller, 
on-demand DNA or RNA sequencing tests, with the potential to transform a range 
of applications where rapid insights are required at low cost.

Oxford Nanopore's goal is to enable the analysis of any living thing, by 
anyone, anywhere. Flongle is designed to bring this goal closer and to also 
allow low-cost sequencing at any time. With its compact format, Flongle opens 
up possibilities of on-demand testing in a broad range of locations, from 
scientific laboratories to farms and factories, healthcare settings, outdoor 
environments or classrooms.

Flongle is an adapter for the portable MinION and desktop GridION X5 sequencing 
devices. It uses the same core nanopore sequencing technology as other Oxford 
Nanopore devices, producing real-time data, direct sequencing and long reads. 
The small Flongle flow cells can currently produce as much as 1.8 Gb of 
sequence data with headroom for more than 3 Gb. This enables many sequencing 
experiment types, including small-genome sequencing, targeted panels/amplicon 
sequencing, metagenomics for the identification of viruses, bacteria or 
characterisation of microbiomes, or species ID. It can also be used for quality 
control for larger nanopore experiments.

At $90 per flow cell, Flongle allows on-demand sequencing at an affordable 
price point, without needing to wait for the large batches of samples that are 
often required to achieve low per-test costs on traditional sequencing devices. 
The workflow is fast and simple, with library preparation in as little as ten 
minutes and real-time data analysis.

Dr Matt Loose, from DeepSeq, School of Life Sciences, University of Nottingham, 
has been testing the Flongle as part of an early access programme. "We've been 
using Flongle for testing and developing new protocols such as CRISPR/Cas9 
selection for targeting select regions of the human genome, as well as working 
up new samples before running at scale on PromethION.  We've been very happy 
with throughput and yield on early access flow cells and are looking forward to 
incorporating production-ready Flongle into our workflows. It will be really 
interesting to see how users apply Flongle in the field."

https://twitter.com/mattloose/status/1067115112220295168   

https://twitter.com/mattloose/status/1053307734802776070 

Miten Jain, from the University of California, Santa Cruz, has also been 
trialling Flongle: "Flongle-based sequencing is the best way to check a 
nanopore library. At UC Santa Cruz, we now routinely sequence native RNA and 
genomic DNA libraries on a Flongle Flow Cell before scaling them to our 
PromethION.  We have observed that Flongle-based sequencing is a good predictor 
of library quality and its performance on the PromethION.  Flongle also permits 
experimental tests at a more affordable scale and will be an integral part of 
our nanopore work going forward." 

Dr Justin O'Grady is a translational researcher from University of East Anglia, 
UK.  He has been developing nanopore-based research methods for the rapid 
metagenomic characterisation of pathogens in clinical samples from patients 
with pneumonia or urinary tract infections.  "I am excited about how Flongle 
can help identify pathogens and antimicrobial resistance more quickly, and how 
such technologies could be used in settings much closer to patients in the 
future."  

https://twitter.com/Justin_OGrady/status/1055855306754924544 

Flongle starter packs are now available in store. These starter packs include 
the Flongle adapter and users can choose to run these on their MinION or 
GridION devices. Users will be able to purchase additional flow cells for $90 
each. Protocols are being made available and use the current preparation kits 
already compatible with MinION, GridION and PromethION.

Oxford Nanopore is now taking pre-orders for  the MinION Mk1C 
https://nanoporetech.com/products/minion-mk1c, which combines the real-time, 
portable sequencing of MinION with powerful computing and a high-resolution 
touchscreen. This device will be compatible with Flongle enabling rapid, 
field-based analyses; more information will be provided soon.

Video - https://mma.prnewswire.com/media/834428/Oxford_Nanopore_Flongle.mp4 
Photo - https://mma.prnewswire.com/media/834426/Oxford_Nanopore_Flongle.jpg 

Contact: Zoe McDougall, media@nanoporetech.com 

Source: Oxford Nanopore Technologies